<?xml version="1.0" encoding="utf-8" ?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom" xmlns:r="https://r-universe.dev"><channel><title>arvindiyer.r-universe.dev</title><link>https://arvindiyer.r-universe.dev</link><description>Recent package updates in arvindiyer</description><generator>R-universe</generator><image><url>https://github.com/arvindiyer.png</url><title>R packages by arvindiyer</title><link>https://arvindiyer.r-universe.dev</link></image><lastBuildDate>Sun, 12 Jul 2026 07:24:53 GMT</lastBuildDate><item><title>[csogroup] SelectSim 0.1.6</title><author>ayalurarvind@gmail.com (Arvind Iyer)</author><description>Implements the 'SelectSim' methodology for identifying
patterns of co-occurrence and mutual exclusivity between
functional genomic alterations in cancer cohorts. The package
processes mutation annotation data, constructs alteration
matrices, estimates expected alteration-pair frequencies, and
quantifies deviations associated with selective interactions.
The methodology is described in Iyer et al. (2026)
&lt;doi:10.1038/s41588-026-02661-4&gt;.</description><link>https://github.com/r-universe/csogroup/actions/runs/39388476646</link><pubDate>Sun, 12 Jul 2026 07:24:53 GMT</pubDate><r:package>SelectSim</r:package><r:version>0.1.6</r:version><r:status>success</r:status><r:repository>https://csogroup.r-universe.dev</r:repository><r:upstream>https://github.com/csogroup/selectsim</r:upstream><r:article><r:source>data_processing.Rmd</r:source><r:filename>data_processing.html</r:filename><r:title>Data Processing with SelectSim</r:title><r:created>2024-08-23 07:23:18</r:created><r:modified>2026-07-12 07:24:53</r:modified></r:article><r:article><r:source>introduction.Rmd</r:source><r:filename>introduction.html</r:filename><r:title>Introduction to SelectSim</r:title><r:created>2024-08-23 07:23:18</r:created><r:modified>2026-07-12 07:24:53</r:modified></r:article></item></channel></rss>